Assemble 1.0.1 and S2S 2.0.1 are available

You can get them by selecting the "Update S2S/Assemble" choice in the Help menu of each tool. The main improvements and bug fixes are the following:

- Assemble 1.0 had problems to load a model where parts of the 2D were not present in the 3D. A workaround was to export all the residues into the 3D scene and to save the model (which is not practical if the 2D was large). Assemble 1.0.1 fixes now this problem.

Assemble 1.0: only the residues in red are present in the 3D scene.

You can see that the bases are weird.

The same model loaded by Assemble 1.0.1

- Assemble 1.0.1 provides now a button to reload the RNA Motifs library. This is useful to display the motifs created/deleted from a second Assemble application launched in parallel.

- the ability to export single residues into the 3D scene of Assemble has been restored. Once the "Residues" selection mode activated, select in the 2D panel the residues to export and click on the "Generate 3D from 2D" button.

- in S2S 2.0.1, the different selection modes are reactivated for the reference sequence in the alignment panel (Residues, Interactions, Structural Domains)

- when a tertiary structure is imported into the MyPDB library, its secondary structure is calculated during the import (in Assemble 1.0, this was done when the 3D was loaded for the first time). Consequently, once imported, this new 2D/3D can be targeted by the Search panel.

- the communication between S2S and Assemble has been improved (and will be described in more details in an upcoming blog post)